Hi,
I have just received a new dataset to work on so I ran it through FastQC.
I got some really strange looking base quality results.
It looks like the vast majority of reads have absolutely terrible quality, and that there are a small subset that look more normal.
This is basically a ChIP-seq data set, sequenced on illumina.
Is the data a bust?
Thanks,
Jon
I have just received a new dataset to work on so I ran it through FastQC.
I got some really strange looking base quality results.
It looks like the vast majority of reads have absolutely terrible quality, and that there are a small subset that look more normal.
This is basically a ChIP-seq data set, sequenced on illumina.
Is the data a bust?
Thanks,
Jon
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