Hi,
I was wondering if there is a typo in the script here:
Did you mean to check the sam file? (untreated1.sam)
How can you see in the fastA file how many reads were aligned?
Thanks
I was wondering if there is a typo in the script here:
Code:
awk '$3!="*"' untreated1.fa|wc -l wc -l untreated1.fa
How can you see in the fastA file how many reads were aligned?
Thanks
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