I am using the geli format in GATK while trying to sequence some data and wondering how to find the relative ratio for the reference calls to the variant calls. Does anyone know if it involves the Log Odds functions?????
Even just additional info on geli format would be great. I am testing it out and seeing if it will work good for the data I am using
Even just additional info on geli format would be great. I am testing it out and seeing if it will work good for the data I am using