spotted this in solid software tools page.
PerM perm PerM is an ultra-fast and sensitive SOLiD reads mapping tool. It maps reads in csfasta (w/wo qual), fasta or fastq format to the genome or transcriptoms in fasta. The output could be the SAM format. PerM can be full sensitive to four mismatches and highly sensitive to more mismatches.
anyone using it?
PerM perm PerM is an ultra-fast and sensitive SOLiD reads mapping tool. It maps reads in csfasta (w/wo qual), fasta or fastq format to the genome or transcriptoms in fasta. The output could be the SAM format. PerM can be full sensitive to four mismatches and highly sensitive to more mismatches.
anyone using it?
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