SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics



Similar Threads
Thread Thread Starter Forum Replies Last Post
SOAP alignment format convert to SAM/BAM KevinLam Bioinformatics 31 01-10-2018 08:05 PM
How to convert BED format to SAM/BAM? seq_newbie Bioinformatics 1 06-23-2011 08:11 AM
how to convert sam to bam with EOF marker in header jianfeng.mao Bioinformatics 2 12-17-2010 05:56 AM
How to convert Eland file to BAM or SAM? fanshu Bioinformatics 0 10-30-2010 11:46 PM
convert BAM -> SAM? thinkRNA Bioinformatics 4 06-30-2010 03:08 AM

Reply
 
Thread Tools
Old 01-15-2010, 08:20 AM   #1
rcorbett
Member
 
Location: canada

Join Date: Sep 2009
Posts: 29
Default how to convert from bam or sam to map

Hi all,
Apologies if this is posted elsewhere. I didn't find a solution.

I am looking for a tool that will allow me to convert a SAM or BAM file, back into a MAP file.
I want to do this for comparison of some analysis tools we are investigating.

Does anyone know of a tool to do this?

thanks,
Richard
rcorbett is offline   Reply With Quote
Old 11-04-2010, 10:49 AM   #2
bioinfosm
Senior Member
 
Location: USA

Join Date: Jan 2008
Posts: 482
Default

<bump>

any updates? on bam to maq conversion
__________________
--
bioinfosm
bioinfosm is offline   Reply With Quote
Reply

Tags
bam, map, sam

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 07:28 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO