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Old 01-10-2011, 05:13 AM   #1
khb
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Location: Oslo

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Question MACS peaks.bed

Hi
I wounder how MACS score the peaks. When you run MACS you get a output peaks.bed, this file include chromosome, start, stop, peaknumber and a score. How does MACS create this score? Does the length of the peak affect the score value?
Thanks
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Old 03-25-2012, 04:03 AM   #2
rebrendi
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is it really the score in the last column of the "NAME_peaks.bed" file?
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