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09-29-2009, 08:54 PM
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#1 |
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Member
Location: new orleans Join Date: Jun 2009
Posts: 12
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In gene annotation table/gff3, why is same gene name appeared in different chromosome
I found some genes with same gene name but in different chromosome, anyone knows the reason?
For example: chr19 hg18_refFlat gene 763518 772952 . - . ID=PRG2; chr11 hg18_refFlat gene 56911410 56914706 . - . ID=PRG2; chr8 hg18_refFlat gene 38576850 38577932 . - . ID=RNF5P1; chr6 hg18_refFlat gene 32254210 32256545 . + . ID=RNF5P1; chr24 hg18_refFlat gene 1670486 1681411 . + . ID=SFRS17A; chr23 hg18_refFlat gene 1670486 1681411 . + . ID=SFRS17A; Does anyone tell me where I can find related introduction about this kind of problem? Thanks a lot! |
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01-14-2010, 09:55 AM
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#2 |
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Member
Location: Manchester, UK Join Date: Jan 2009
Posts: 29
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Aren't chr23 and chr24 chrX and chrY ? I am facing a similar problem with some illumina data.
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