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Thread | Thread Starter | Forum | Replies | Last Post |
Contig Integrator for Sequence Assembly (CISA) error | illinu | Bioinformatics | 12 | 11-21-2014 08:58 AM |
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SRMA Problem SAMRecord contig does not match the current reference sequence contig | gavin.oliver | Bioinformatics | 5 | 07-05-2011 06:28 AM |
Contig assembly | Ashu | Bioinformatics | 3 | 03-08-2011 05:16 AM |
contig assembly | yh_gu | Bioinformatics | 4 | 08-08-2010 09:08 AM |
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#1 |
Junior Member
Location: Brazil Join Date: Aug 2019
Posts: 3
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Hi every one.
I have tried to run CISA and I've got this error: SyntaxError: Missing parentheses in call to 'print'. Did you mean print(n_h)? CISA2 Done! CISA3... Traceback (most recent call last): File "/home/fuser/miniconda3/envs/bioinfo/bin/CISA.py", line 44, in <module> my_work.Start(CISA_S,current_p,makeblastdb,blastn) File "/home/fuser/miniconda3/envs/bioinfo/bin/CISA1.3/src/CISA3/Controllor_R3.py", line 61, in Start my_f=open(current_p+'/CISA2_thr.out') IOError: [Errno 2] No such file or directory: '/home/user/directory_1/subdiretory/CISA_consenso/genomeID_consenso/CISA2_thr.out' Can anybody help me? |
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