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Old 06-06-2014, 01:15 PM   #1
watermark
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Location: Germany

Join Date: Nov 2013
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Wink Problem in Mapping UCSC isoforms IDs to RefSeq IDs.

Hi all,

I'm using TCGA RNAseq data for Isoforms expression level. in one part of my work, I need to map the ids of isoforms to the RefSeq IDs. I tried the following file, but I was able to map just only 20% of IDs. Does anyone knows a better way to do it?
I used this file to map my IDs.
http://hgdownload.cse.ucsc.edu/golde...oRefSeq.txt.gz

Also, I attached subset of my IDs which I need to map them to RefSeq IDs.
Attached Files
File Type: txt Myids (2).txt (18.6 KB, 0 views)
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bioinformatic analaysis, rnaseq, tcga maf annotation, ucs

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