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Old 08-16-2009, 10:45 AM   #1
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Location: Canada

Join Date: Jun 2008
Posts: 103
Default Local UCSC genome browser server

We have some wig files (solexa mapping results).

The reference genome is Poplar (Populus). The UCSC does not provide this genome. We have genome sequence and GFF file.

Can we set up a local server to view the wig files and poplar genome?

Last edited by baohua100; 08-16-2009 at 05:26 PM.
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Old 08-16-2009, 03:10 PM   #2
Location: Melbourne, Australia

Join Date: Jan 2009
Posts: 37

Isn't UCSC a bit overkill, particularly when it won't provide you with feature tracks anyhow? What's wrong with a standalone viewer?
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