Hi everybody,
i am working with transcriptome data and for the last weeks i was looking for contamination in my illumina data set.
So know i have an id list of the contaminated loci and want to remove this sequences from my transcript (fasta) file.
I am still a perl newbie and did until now not find a script which works like i want.
perhaps someone could please help me,
kind regards
i am working with transcriptome data and for the last weeks i was looking for contamination in my illumina data set.
So know i have an id list of the contaminated loci and want to remove this sequences from my transcript (fasta) file.
I am still a perl newbie and did until now not find a script which works like i want.
perhaps someone could please help me,
kind regards
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