Dear all,
I am a beginner for ChIP-Seq. After obtaining sequencing raw data from Illumina GA, I am trying to load my raw data (text files) to CisGenome. I already have loaded genome database (hg19) to CisGenome after installation. According to the tutorial of CisGenome, maybe, I can load my ChIP-Seq data by the manu "Sequencing -> Alignment -> BAR". However, I cannot load now. Could you please teach me how can I do for that? Actually, I don't know well which text file (s_#_sorted.txt, s_#_eland_extended, or s_#_sequence???) is suitable for CisGenome. And also, the format conversion from ELAND to ALN is not working in my case. I will appreciate you if you help me. Thank you.
Space
I am a beginner for ChIP-Seq. After obtaining sequencing raw data from Illumina GA, I am trying to load my raw data (text files) to CisGenome. I already have loaded genome database (hg19) to CisGenome after installation. According to the tutorial of CisGenome, maybe, I can load my ChIP-Seq data by the manu "Sequencing -> Alignment -> BAR". However, I cannot load now. Could you please teach me how can I do for that? Actually, I don't know well which text file (s_#_sorted.txt, s_#_eland_extended, or s_#_sequence???) is suitable for CisGenome. And also, the format conversion from ELAND to ALN is not working in my case. I will appreciate you if you help me. Thank you.
Space
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