Hello community,
I have just received a fastq file of a study i am conducting.
It had an overall poor quality, and after filetering reads according to quality and size (minQV=17, min length=16), the number of reads decreased from 95428 to 29635. And the quality increase markedly.
My question is if it would be still possible to use those ~30000 readss fro mapping.
Best regards and thanks!
Sergio
I have just received a fastq file of a study i am conducting.
It had an overall poor quality, and after filetering reads according to quality and size (minQV=17, min length=16), the number of reads decreased from 95428 to 29635. And the quality increase markedly.
My question is if it would be still possible to use those ~30000 readss fro mapping.
Best regards and thanks!
Sergio
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