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Old 08-13-2011, 06:01 PM   #1
cdragon
Professor of Health Informatic
 
Location: Shenzhen, Guangdong, China

Join Date: Jan 2010
Posts: 12
Default IEEE BIBM 2011 Workshop: Cancer Informatics

IEEE BIBM 2011 Workshop: Cancer Informatics

IEEE BIBM 2011 worshop: Cancer Informatics CFP (firm deadline: Sep 20, 2011)

Dear all,

Please help distribute the IEEE BIBM 2011 Cancer Informatics workshop CFP to
your friends, colleagues and students and encourage them to submit their
research work to the workshop by July September 20, 2011.

More information can be found at
http://csbl.bmb.uga.edu/~juancui/bibm2011/index.html. The important dates
are as follows:

September 20, 2011: Due date for full workshop papers submission October 5,
2011: Notification of paper acceptance to authors October 15, 2010:
Camera-ready of accepted papers November 12-15: Workshops


Call for Papers

This workshop aims to provide a forum for discussion on integrated analyses
of multiple data types, comparative analyses across multiple cancer types,
computational prediction and modeling related (but not limited) to cancer
genome analysis, cancer genome evolution, genomic mutations versus cancer
microenvironments, cancer pathway and network elucidation, biomarker
identification, cell-cell communication.

We welcome both computational and biomedical research to submit papers with
unpublished and original research, with particular emphasis on, but not
limited to:

. Integrated analysis of multiple omic data types relevant to mechanism of
cancer and cancer diagnosis (including subtyping and staging) and prognosis;


. Inference of novel regulatory, signaling and metabolic pathways related
to cancer through comparative "-omics" analyses across multiple cancers;

. Prediction of cancer-associated biological network interactions
contributing to cancer development and progression;

. Understanding of miRNA regulation network in cancers;

. Drug target discovery through integrated "-omics" data analyses;

. Studying "driver" versus "passenger" mutations in cancer through
integrated data analyses;

. Cancer genome evolution;

. Modeling of biological processes in cancer.

Best Regards,
Workshop Co-Chairs
Juan Cui, Guojun Li & Shaying Zhao

============================================================================
========================================================================
Main conference


2011 IEEE International Conference on Bioinformatics and Biomedicine
(BIBM11)

Atlanta, Georgia, USA, Nov. 12-15, 2011

http://www.cs.gsu.edu/BIBM2011/

IEEE BIBM 2011 provides a general forum for disseminating the latest
research in bioinformatics and health informatics. It brings together
academic and industrial scientists from computer science, biology,
chemistry, medicine, mathematics and statistics. Hong Kong is a vibrant
business city with many attractions and a distinctive culture.

. Journal special issues: IEEE BIBM has a tradition to publish
selected papers as special issues in highly respected SCI indexed journals.
So far we have confirmed the special issues publications with IEEE
Transactions on NanoBiosceiences, International Journal of Data Mining and
Bioinformatics, BMC Bioinformatics, Proteomics. (In the past BIBM
conference, the number of special issues is: BIBM 2010-7 special issues,
BIBM 2009-4 special issue; BIBM 2008-4 special issues)

. Student Travel Award: BIBM 2011 will offer 20 student travel awards
to student authors including post-doc

We solicit high-quality original research papers (including significant
work-in-progress) in any aspect of bioinformatics and biomedicine. New
computational techniques and methods in machine learning; data mining; text
analysis; pattern recognition; knowledge representation; databases; data
modeling; combinatorics; stochastic modeling; string and graph algorithms;
linguistic methods; robotics; constraint satisfaction; data visualization;
parallel computation; data integration; modeling and simulation and heir
application in life science domain are especially encouraged Relevant topics
include but are not limited to:

1. Genomics and Molecular Structure, Function and Evolution
a. Next-Gen Sequencing and Metagenomics
b. Evolution, Phylogeny, Comparative Genomics
c. SNPs and haplotype analysis, GWAS
d. Protein/RNA Structure, Function and Interactions

2. Computational Systems Biology
a. Transcriptomics - Microarray Data Analysis
b. Gene Regulation, Alternative Splicing, Network/Pathway Analysis
c. Proteomics, PTMs, Metabolomics
d. Epigenomics, non-coding RNA analysis, DNA methylation analysis

3. Medical Informatics and Translational Bioinformatics
a. Biomedical Intelligence, Clinical Data Analysis, and Electronic
Health Record
b. Biomedical Signal/Image Analysis
c. Genome-Phenome Analysis
d. Biomarker Discovery

4. Cross-Cutting Computational Methods and Bioinformatics
Infrastructure
a. Biomedical Text Mining and Ontologies
b. Biological Data Mining and Visualization
c. Computational Modeling and Data Integration
d. High Performance Computing


INDUSTRIAL Track
The Industrial Track solicits papers describing implementations of
Bioinformatics and Biomedicine solutions relevant to industrial settings.
The focus of industry track is on papers that address the practical,
applied, or pragmatic or new research challenge issues related to the use of
bioinformatics and biomedicine technologies in industry.

Conference Co-Chairs:
Prof. Yi Pan
Georgia State University, USA
pan@cs.gsu.edu

Prof. Stephen Wong
The Methodist Hospital Research Institute, USA stwong@tmhs.org

Program Co-Chairs:
Prof. Shinichi Mori****a
University of Tokyo, Japan
moris@cb.k.u-tokyo.ac.jp

Prof. Fangxiang Wu
University of Saskatchewan, Canada
Faw341@mail.usask.ca

Prof. Mohammed Zaki
Rensselaer Polytechnic Institute, USA
zaki@cs.rpi.edu

Industry Program Committee Chair
Dr. Anastasia Christianson
AstraZeneca, USA

BIBM Steering Committee Chair:
Prof. Xiaohua Tony Hu
Drexel University, USA
thu@cis.drexel.edu


Paper Submission:
Please submit a full-length paper (8 page IEEE 2-column format) through the
online submission system (you can download the format instruction here
(http://wi-lab.com/cyberchair/2011/bibm11/cbc_index.html) for Latex or
word). Electronic submissions (in PDF or Postscript format) are required.
Selected participants will be asked to submit their revised papers in a
format to be specified at the time of acceptance.

Online Submission:
http://wi-lab.com/cyberchair/2011/bibm11/cbc_index.html

Important Dates:

Electronic submission of full papers: July 31, 2011 Notification of paper
acceptance: September 5, 2011 Camera-ready of accepted papers: October 1,
2011
Conference: November 12-15, 2011

Best regards!

Shinichi Mori****a, FangXiang Wu, and Mohammed J. Zaki IEEE BIBM 2011 PC
Co-Chairs
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