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Old 04-23-2013, 10:41 PM   #1
rhinoceros
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Exclamation MEGAN and NCBI taxonomy

Does anyone know how the MEGAN team processes the gi_taxid_nucl.dmp.gz and gi_taxid_prot.dmp.gz files from ftp://ftp.ncbi.nih.gov/pub/taxonomy/?

The file stock MEGAN uses is from 18-July-2012 and as I'd like to minimize the number of unassigned reads, it would be very important to use the latest version.
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