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Old 05-12-2018, 12:57 AM   #1
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Join Date: Dec 2017
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Default Problem with trimming after FastQC


After using a FastQC I noticed that I have red flags in Per base sequence content and in Per base content.

I used Trimmomatic for solving these problems, but it solve problem only for per base N content, but not for per base sequence content. Moreover, after using Trimmomatic I have yellow flag in sequence length distribution.
Could you help me how to resolve these problems?

Thank you in advance.
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barthez95 is offline   Reply With Quote

fastqc, quality control

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