Hi,
I'm very new to RNA-Seq. I just ran cuffdiff for comparing gene expression levels in two conditions.
In the gene_exp.diff file, I found that some CUFF ids have the same locus, although the fpkms are different. I'm just wondering why the same locus will be assigned different CUFF ids, and why the expression level is different?
Thank you very much
Xiaoyu
I'm very new to RNA-Seq. I just ran cuffdiff for comparing gene expression levels in two conditions.
In the gene_exp.diff file, I found that some CUFF ids have the same locus, although the fpkms are different. I'm just wondering why the same locus will be assigned different CUFF ids, and why the expression level is different?
Thank you very much
Xiaoyu
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