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Old 08-13-2010, 07:25 AM   #1
repinementer
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Location: asia

Join Date: Dec 2009
Posts: 80
Default cufflinks exonic reads count

Is there any way to filter down all exonic reads only that doesn't include any junction reads. None of the cufflinks output files or tophat files are giving the number of reads that are spanning exon regions.

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