Hi all,
We have a cancer related transcriptome data which is sequenced using 454 GS-FLX titanium, for which reference genome is available.
I want to set work pipeline for bioinformatics analysis, so I need help regarding from where to start, which software to use and best for 454 long read data as i am going to perform gene expression analysis. Linux operating is no issue for software, as i am working on both windows & linux. So far i have tried CLC genomics workbench and DNASTAR's QSeq.
Looking forward for useful inputs/suggestions.
Thanks.
We have a cancer related transcriptome data which is sequenced using 454 GS-FLX titanium, for which reference genome is available.
I want to set work pipeline for bioinformatics analysis, so I need help regarding from where to start, which software to use and best for 454 long read data as i am going to perform gene expression analysis. Linux operating is no issue for software, as i am working on both windows & linux. So far i have tried CLC genomics workbench and DNASTAR's QSeq.
Looking forward for useful inputs/suggestions.
Thanks.
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