I don't know what is going on here. GOSeq use to work fine for me. Now there seems to be some problem with finding the database. I think I've narrowed to problem down to the following code:
I'm running R version 2.13.2 and GOSeq version 1.4.0.
I have tried a few genome/gene ID combinations.
Any ideas would be greatly appreciated. Thanks.
Code:
> library(goseq) > GO.pvals=goseq(pwf,'hg19','ensGene') Fetching GO annotations... Error in library(paste(orgstring, "db", sep = "."), character.only = TRUE) : there is no package called 'org.Hs.eg.db'
I have tried a few genome/gene ID combinations.
Any ideas would be greatly appreciated. Thanks.
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