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>> Next Generation Sequencing is developing into a really hot topic. The
>> hardware platforms for deep sequencing are mature in the meantime,
>> however one question remains:
>>
>> How can I get the most out of the generated data?
>>
>> To give answers to this question, Genomatix together with partners
>> has focused considerable efforts on Next Generation Sequencing data
>> analysis.
>>
>> In order to disseminate the gained know-how to the scientific
>> community with an interest in this field, the European Molecular
>> Biology Lab (EMBL) together with Genomatix invites you to:
>>
>> *A Joint EMBL/Genomatix Workshop on mRNA-Seq and ChIP-Seq -
>> *
>>
>> * Comprehensive Methods for Next Generation Sequencing Data Analysis
>>
>> on Monday, **March **9 - Tuesday, **March **10, 2009*
>>
>> at the EMBL in Heidelberg.
>>
>>
>> The workshop will cover NGS data analysis strategies, both for
>> mRNA-Seq data as well as for ChIP-Seq.
>>
>> As a special offer you can bring your own data which will be analyzed
>> on the second day of the workshop.In case you are interested in such,
>> please contact us ([email protected]) one week before the start of
>> the seminar latest.
>>
>> Among others the following areas will be covered
>>
>> • high efficiency mapping of raw sequence tags • clustering of
>> sequence tags (peak finding) • data integration into up to date
>> genome annotation • downstream analysis of peak regions • calculation
>> of expression values and profiles • global correlations of peak
>> regions with genomic elements • transcription factor analysis and
>> de-novo motif discovery
>>
>> The first day of the course is based on real world examples. We will
>> show the possibilities for extending genome annotation, splice
>> variant detection and discovery of new transcriptional units. In
>> addition the downstream biological mining of enriched regions from
>> ChIP-Seq will be demonstrated.
>> This will focus on transcription factor (TF) analysis in terms of TF
>> overrepresentation in enriched regions and the discovery of
>> functional motifs and patterns of TFs. New insights into biological
>> mechanisms can be gained by overlaying data from different experiment
>> types.
>>
>> Registration deadline is 22 February 2009; the number of participants
>> is limited to 16. So please hurry up! Participation is on a first
>> come, first serve basis
>>
>> For registration, please go to the EMBL Heidelberg home page:
>>
>> http://www-db.embl.de/jss/EmblGroupsOrg/conf_120
>> <http://www-db.embl.de/jss/EmblGroupsOrg/conf_120>
>>
>> We are looking forward to welcoming you and to a lively scientific
>> exchange!
>>
>> Best regards
>>
>> Christian Zinser
>>
>> Dr. Christian Zinser
>> Head of Training
>>
>> Genomatix Software GmbH
>> Bayerstrasse 85a
>> 80335 Munich
>> Germany
>> http://www.genomatix.de
>>
>> Phone +49-89-599 766 0
>> Fax +49-89-599 766 55
>> E-mail [email protected]
>> hardware platforms for deep sequencing are mature in the meantime,
>> however one question remains:
>>
>> How can I get the most out of the generated data?
>>
>> To give answers to this question, Genomatix together with partners
>> has focused considerable efforts on Next Generation Sequencing data
>> analysis.
>>
>> In order to disseminate the gained know-how to the scientific
>> community with an interest in this field, the European Molecular
>> Biology Lab (EMBL) together with Genomatix invites you to:
>>
>> *A Joint EMBL/Genomatix Workshop on mRNA-Seq and ChIP-Seq -
>> *
>>
>> * Comprehensive Methods for Next Generation Sequencing Data Analysis
>>
>> on Monday, **March **9 - Tuesday, **March **10, 2009*
>>
>> at the EMBL in Heidelberg.
>>
>>
>> The workshop will cover NGS data analysis strategies, both for
>> mRNA-Seq data as well as for ChIP-Seq.
>>
>> As a special offer you can bring your own data which will be analyzed
>> on the second day of the workshop.In case you are interested in such,
>> please contact us ([email protected]) one week before the start of
>> the seminar latest.
>>
>> Among others the following areas will be covered
>>
>> • high efficiency mapping of raw sequence tags • clustering of
>> sequence tags (peak finding) • data integration into up to date
>> genome annotation • downstream analysis of peak regions • calculation
>> of expression values and profiles • global correlations of peak
>> regions with genomic elements • transcription factor analysis and
>> de-novo motif discovery
>>
>> The first day of the course is based on real world examples. We will
>> show the possibilities for extending genome annotation, splice
>> variant detection and discovery of new transcriptional units. In
>> addition the downstream biological mining of enriched regions from
>> ChIP-Seq will be demonstrated.
>> This will focus on transcription factor (TF) analysis in terms of TF
>> overrepresentation in enriched regions and the discovery of
>> functional motifs and patterns of TFs. New insights into biological
>> mechanisms can be gained by overlaying data from different experiment
>> types.
>>
>> Registration deadline is 22 February 2009; the number of participants
>> is limited to 16. So please hurry up! Participation is on a first
>> come, first serve basis
>>
>> For registration, please go to the EMBL Heidelberg home page:
>>
>> http://www-db.embl.de/jss/EmblGroupsOrg/conf_120
>> <http://www-db.embl.de/jss/EmblGroupsOrg/conf_120>
>>
>> We are looking forward to welcoming you and to a lively scientific
>> exchange!
>>
>> Best regards
>>
>> Christian Zinser
>>
>> Dr. Christian Zinser
>> Head of Training
>>
>> Genomatix Software GmbH
>> Bayerstrasse 85a
>> 80335 Munich
>> Germany
>> http://www.genomatix.de
>>
>> Phone +49-89-599 766 0
>> Fax +49-89-599 766 55
>> E-mail [email protected]