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02-21-2014, 04:03 AM
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#1 |
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Senior Member
Location: Germany Join Date: May 2010
Posts: 150
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normalizing wig files
Hi,
I have a script with multiple steps to analyse RNA-Seq data. One of the steps is running DESeq analysis over the count data, another one is to create wig files from the bam files for visualization. For a meaningful graphs I would like to normalize the wig files. Does it make sense to visualize them according to the size factors values for each sample from the DESeq analysis? Thanks Assa |
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| Tags |
| deseq, normalization, rna seq, wig files |
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