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Old 08-17-2011, 02:56 AM   #1
Palgrave
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Default classify RNA library

I have a small/Long RNA library containing sequences <200 nt.
I want to classify the library into different ncRNA families like snoRNA, miRNA, rRNA, tRNA etc, to get the percentage of each.

Do you know of a good way to classify the content of a small RNA library?
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Old 08-17-2011, 04:04 AM   #2
NicoBxl
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align them against RFam
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Old 08-17-2011, 06:13 AM   #3
Palgrave
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Which tool do you suggest using? Or do I have to make one myself?
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