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Old 09-19-2011, 01:38 AM   #1
dr.m.umer
Junior Member
 
Location: Lyon, France

Join Date: Jul 2011
Posts: 4
Question Beginner

Hi all
I am new to this forum, and of course new to NGS. I have to carry out DNA methylation profiling by MeDIP-Seq (SOLiD). I am almost ignorant about how to analyze the data after sequencing. If someone can suggest me a "beginner's guide" type of article, it would be really helpful. I have some articles but they all are a little advanced and I can not comprehend most of the content in them.

Umer
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Old 09-20-2011, 04:14 AM   #2
ETHANol
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Location: Western Australia

Join Date: Feb 2010
Posts: 308
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Do you know basic UNIX commands? If not, do a tutorial such as this:
http://www.ee.surrey.ac.uk/Teaching/Unix/

Then you have to pick the software you want to use. A good resource is the SEQanswers Wiki.
http://seqanswers.com/wiki/SEQanswers

Where you will find entries like this:
http://td-blade.gurdon.cam.ac.uk/software/batman/
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