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Old 01-08-2012, 08:33 AM   #1
AAWT
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Location: Germany

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Default GFF Annotation file

Dear all,

I am working with Blast2GO and exported annotation as GAF file and for further analysis I need to use CLC genomics workbench which is only accepting GFF/GTF or GVF files.
Can you help me for file format conversion

Thanks

AAWT
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Old 03-22-2012, 09:35 AM   #2
Jmcbulls
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I have the same question, from Blast2GO I can export it as a GAF (Gene Annotation File Format 2.0), .annot, GOStat, or GeneSpring Format. Is there a way to merge this data with my .GTF file in order to combine location information with my new Blast/GO data?

Thanks,
Jack
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Old 12-11-2012, 02:46 PM   #3
mm.perrineau
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Default Helllllppppp PLEASE

I have exactly the same question !!!!!
Somebody have the answer ???
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Old 12-12-2012, 12:58 AM   #4
AAWT
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Yes, if you exported GFF file from Blast2GO, you can force import this file in CLC in gene-ontology GFF file format and GFF is required format for CLC.
Regards

AAWT
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