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01-08-2012, 08:33 AM
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#1 |
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Junior Member
Location: Germany Join Date: Jun 2011
Posts: 6
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GFF Annotation file
Dear all,
I am working with Blast2GO and exported annotation as GAF file and for further analysis I need to use CLC genomics workbench which is only accepting GFF/GTF or GVF files. Can you help me for file format conversion Thanks AAWT |
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03-22-2012, 09:35 AM
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#2 |
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Junior Member
Location: Kansas Join Date: Mar 2012
Posts: 1
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I have the same question, from Blast2GO I can export it as a GAF (Gene Annotation File Format 2.0), .annot, GOStat, or GeneSpring Format. Is there a way to merge this data with my .GTF file in order to combine location information with my new Blast/GO data?
Thanks, Jack |
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12-11-2012, 02:46 PM
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#3 |
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Member
Location: New Jersey Join Date: Sep 2012
Posts: 12
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Helllllppppp PLEASE
I have exactly the same question !!!!!
Somebody have the answer ??? |
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12-12-2012, 12:58 AM
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#4 |
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Junior Member
Location: Germany Join Date: Jun 2011
Posts: 6
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Yes, if you exported GFF file from Blast2GO, you can force import this file in CLC in gene-ontology GFF file format and GFF is required format for CLC.
Regards AAWT |
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