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Old 06-23-2009, 07:42 PM   #1
Location: Malaysia

Join Date: Mar 2009
Posts: 27
Default De novo short read assembly? Which assembler is the best?

I just learn the short read assembly. I know got few assembler program such as velvet, mira and edena, etc are available now.
Got anybody got experience using those three assembly for short read assembly before? My question is listed as below:
Which assembler is the best among all?
What is the main difference between each of the assembler?

Thanks for all of your guide and suggestion
Patrick is offline   Reply With Quote

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