Go Back   SEQanswers > Bioinformatics > Bioinformatics

Similar Threads
Thread Thread Starter Forum Replies Last Post
Error message BreakDancer Martino Bioinformatics 3 11-01-2012 01:22 PM
Error message for MACS sydghyyh14 Bioinformatics 0 07-10-2012 10:59 PM
error message from Structure shuang Bioinformatics 7 01-09-2012 05:23 PM
GEOquery error message akolman Bioinformatics 8 06-06-2011 08:26 AM
Error message from QC metrics froggins The Pipeline 1 01-05-2011 07:53 AM

Thread Tools
Old 08-26-2012, 09:05 PM   #1
Junior Member
Location: China

Join Date: Oct 2011
Posts: 3
Angry error message

Any one knew how to deal with this problem ?
$ perl -buildver hg19 653_snps.avinput -outfile 653_snps ./humandb
NOTICE: the --ver1000g argument is set as '1000g2010nov' by default

NOTICE: Running step 1 with system command < -geneanno -buildver hg19 -dbtype refgene -outfile 653_snps -exonsort 653_snps.avinput ./humandb>

Error running system command: < -geneanno -buildver hg19 -dbtype refgene -outfile 653_snps -exonsort 653_snps.avinput ./humandb>
tmacme is offline   Reply With Quote

annovar annotation,

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 07:32 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO