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06-14-2014, 06:17 AM
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#1 |
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Senior Member
Location: chicago Join Date: Jul 2012
Posts: 354
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bedtools installation on ubuntu
I can not seem to install bedtools on ubuntu.
Here are the steps I am doing. Code:
sudo apt-get install zlib Code:
sudo apt-get install zlib-devel Code:
sudo apt-get install bedtools |
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06-14-2014, 06:43 AM
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#2 |
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Senior Member
Location: UK Join Date: Jan 2010
Posts: 390
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And what are the errors you are encountering?
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06-14-2014, 06:47 AM
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#3 |
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Senior Member
Location: chicago Join Date: Jul 2012
Posts: 354
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someone log into ubuntu as a guest, so sudo apt-get didn't have rights. I log in as admin and everything is fine on the install.
I am running bedtools 2.17.0 and using the mergeBed command I get an error that says comand not found Code:
mergeBed -i hgTables.bed > merged.bed |
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06-14-2014, 07:15 AM
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#4 |
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Senior Member
Location: chicago Join Date: Jul 2012
Posts: 354
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I will re-post this. Thank you.
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