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Old 06-14-2014, 06:17 AM   #1
cmccabe
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Default bedtools installation on ubuntu

I can not seem to install bedtools on ubuntu.

Here are the steps I am doing.

Code:
 sudo apt-get install zlib
Code:
 sudo apt-get install zlib-devel
Code:
 sudo apt-get install bedtools
Thanks.
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Old 06-14-2014, 06:43 AM   #2
Bukowski
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And what are the errors you are encountering?
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Old 06-14-2014, 06:47 AM   #3
cmccabe
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someone log into ubuntu as a guest, so sudo apt-get didn't have rights. I log in as admin and everything is fine on the install.

I am running bedtools 2.17.0 and using the mergeBed command I get an error that says comand not found

Code:
 mergeBed -i hgTables.bed > merged.bed
Thanks.
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Old 06-14-2014, 07:15 AM   #4
cmccabe
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I will re-post this. Thank you.
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