|
|
|
|
|||||||
Similar Threads
|
||||
| Thread | Thread Starter | Forum | Replies | Last Post |
| 10, 50X human exomes per flowcell | JPC | SOLiD | 8 | 07-10-2012 05:05 AM |
| Whole exomes from whole genome | kasthuri | Bioinformatics | 2 | 01-17-2012 07:13 AM |
| dindel, exomes and chromosome 10 | Hena | Bioinformatics | 0 | 12-21-2011 03:53 AM |
| 12 human exomes | vasvale | Literature Watch | 0 | 09-17-2009 06:50 PM |
| pgp10 exomes | cariaso | Personalized Genomics | 1 | 02-12-2009 01:03 PM |
 |
|
|
Thread Tools |
06-16-2010, 09:09 AM
|
#1 |
|
Junior Member
Location: nyc Join Date: Jun 2010
Posts: 2
|
beginner comparing exomes
Hi, starting on my very first NGS project...
I have 2 sequenced exomes in FASTQ format and I want to do a couple basic things: 1. Compute some usual summary statistics for each of the exomes - # of cSNPS, % in dbSNP, #Heterozygous and #homozygous 2. Get a list of SNPs that are common between the 2 exomes. I have been looking into various software options, etc but thought here would be a good place to get some guidance. Thanks in advance. |
|
|
|
| Tags |
| exome analysis, exome statistics, sequence comparison |
| Thread Tools | |
|
|
