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11-06-2015, 07:58 AM
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#1 |
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Junior Member
Location: stockholm, sweden Join Date: Sep 2014
Posts: 1
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Homer makeTagDirectory error with hg19
I have installed hg19 for homer but when I try to make a tag directory:
makeTagDirectory my_tagDirectory -checkGC -genome hg19 -format bed myfile.bed I get the following error messages: Couldn't open a sequence file for "1" (home/user/glob/homer//data/genomes/hg19//genome.fa.masked) ...and so on for every chromosome. I tried giving homer the genome in a separate fasta file, and then it works. Any tips on what might be the problem? |
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| hg19, homer |
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