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Old 05-26-2017, 01:53 AM   #1
Location: Korea

Join Date: May 2017
Posts: 15
Default cannot estimate transcript abundances in Stringtie

Here is the error :
stringtie e B -p 8 -G '/home/atonidas/RNAseq/chrX_data/samples/stringtie_merged.gtf' -o Alpha1.gtf '/home/atonidas/RNAseq/chrX_data/samples/Alpha1.bam' 
Error: input file e cannot be found!
Aborted (core dumped)
Please advice
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Old 05-26-2017, 02:09 AM   #2
Genetic Librarian
Location: Europe

Join Date: May 2017
Posts: 23

well, as stated in the error line the script expects an input file path after the -e option.
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