I have .bam, .vcf, and ANNOVAR .csv files for several samples.
Is there a straightforward way to sort or view mutations that are the most common or present in several samples?
I was thinking of trying to sort the variant location columns in ascending order and line them up for all the samples, but then how would I create a list of the most common variants?
Any ideas are appreciated, thank you.
Is there a straightforward way to sort or view mutations that are the most common or present in several samples?
I was thinking of trying to sort the variant location columns in ascending order and line them up for all the samples, but then how would I create a list of the most common variants?
Any ideas are appreciated, thank you.
Comment