Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • Need help figuring out these errors in Python code... Please help

    Hey guys I'm having issues finding solutions to these problems for my RNAseq python project can anyone help?
    Code:
    Traceback (most recent call last):
      File "<input>", line 1, in <module>
      File "/Applications/PyCharm.app/Contents/helpers/pydev/_pydev_bundle/pydev_umd.py", line 197, in runfile
        pydev_imports.execfile(filename, global_vars, local_vars)  # execute the script
      File "/Applications/PyCharm.app/Contents/helpers/pydev/_pydev_imps/_pydev_execfile.py", line 18, in execfile
        exec(compile(contents+"\n", file, 'exec'), glob, loc)
      File "/Users/screadore/Desktop/RNAcode/CodePackageE.py", line 118, in <module>
        df = get_data()
    Last edited by GenoMax; 09-10-2019, 08:56 AM. Reason: Added [code] tags

  • #2
    You need to provide more information about what software you are running, how you are running it. Is it custom code you wrote or a package that is available on web?

    Comment


    • #3
      Originally posted by screadore View Post
      Hey guys I'm having issues finding solutions to these problems for my RNAseq python project can anyone help?
      Code:
      Traceback (most recent call last):
        File "<input>", line 1, in <module>
        File "/Applications/PyCharm.app/Contents/helpers/pydev/_pydev_bundle/pydev_umd.py", line 197, in runfile
          pydev_imports.execfile(filename, global_vars, local_vars)  # execute the script
        File "/Applications/PyCharm.app/Contents/helpers/pydev/_pydev_imps/_pydev_execfile.py", line 18, in execfile
          exec(compile(contents+"\n", file, 'exec'), glob, loc)
        File "/Users/screadore/Desktop/RNAcode/CodePackageE.py", line 118, in <module>
          df = get_data()

      cross-posted in https://www.reddit.com/r/Python/comm..._these_issues/

      Comment

      Latest Articles

      Collapse

      • seqadmin
        Current Approaches to Protein Sequencing
        by seqadmin


        Proteins are often described as the workhorses of the cell, and identifying their sequences is key to understanding their role in biological processes and disease. Currently, the most common technique used to determine protein sequences is mass spectrometry. While still a valuable tool, mass spectrometry faces several limitations and requires a highly experienced scientist familiar with the equipment to operate it. Additionally, other proteomic methods, like affinity assays, are constrained...
        04-04-2024, 04:25 PM
      • seqadmin
        Strategies for Sequencing Challenging Samples
        by seqadmin


        Despite advancements in sequencing platforms and related sample preparation technologies, certain sample types continue to present significant challenges that can compromise sequencing results. Pedro Echave, Senior Manager of the Global Business Segment at Revvity, explained that the success of a sequencing experiment ultimately depends on the amount and integrity of the nucleic acid template (RNA or DNA) obtained from a sample. “The better the quality of the nucleic acid isolated...
        03-22-2024, 06:39 AM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by seqadmin, 04-11-2024, 12:08 PM
      0 responses
      25 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 04-10-2024, 10:19 PM
      0 responses
      27 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 04-10-2024, 09:21 AM
      0 responses
      24 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 04-04-2024, 09:00 AM
      0 responses
      52 views
      0 likes
      Last Post seqadmin  
      Working...
      X