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  • CLIP-seq database: PAR-CLIP, HITS-CLIP, iCLIP, eCLIP, irCLIP for RBP binding sites

    Recent advances in high-throughput sequencing of immunoprecipitated RNAs after cross-linking (CLIP-Seq) provide powerful ways to identify biologically relevant miRNA-target and RNA-binding protein(RBP)–RNA interactions.

    starBase v3.0 CLIP-seq database provides more than 700 CLIP-seq data from 203 RNA-binding proteins(RBPs). The CLIP technologies contains PAR-CLIP, HITS-CLIP, iCLIP, eCLIP, dCLIP, CLASH, CLEAR-CLIP, irCLIP,sCLIP, uvCLIP, etc.

    starBase v3.0 is the first platform to visualize the binding motifs of RBPs by de novo analyzing the CLIP-seq data and provides genomic coordinates of identified RBPs binding motifs across different cell types, tissues and conditions.

    All CLIP-seq datasets is freely available at
    http://starbase.sysu.edu.cn/download.php

    All RBP motifs is freely available at http://starbase.sysu.edu.cn/rbpMotif.php


  • #2
    stabase website "Access Forbidden"

    Hello
    when I try to use the starbaseV3 website a "Access Forbidden" message appear.

    Is this permanent new rules or a transient problem?
    Thank you



    资源或业务被限制访问

    因以下原因:

    一、资源或业务仅限中山大学教职员和学生访问(请在校园网内或通过VPN隧道访问),或

    二、资源或业务不在服务时段(请在服务时段访问)。
    Access Forbidden

    1. The web page that you are trying to access is ONLY provided for students,faculty and staff of Sun Yat-sen University.

    2. The website can ONLY be accessed during restricted hours.

    Comment

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