Hi,
I am asking a help for Illumina small rna sequencing data analysis. I got the small RNA sequencing data and am doing data analysis. However I have a question of small RNA adapter sequence. Here is some part of fasta file. Could you tell me which part is adapter sequence of the adapter (GCCAAT is the bar code)? I cannot find it in the website manual. Could you do me a favor? Thanks!
@HWI-H232:62:C1AV0ACXX:8:1308:20071:200816 1:N:0:GCCAAT
CCGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGCCAATATCTCGT
+
@@@FAADAFHHHHJIII;FFHHIJFGHIEGIGIGHJEIIGIIIIJGIIJH
@HWI-H232:62:C1AV0ACXX:8:1308:20244:200844 1:N:0:GCCAAT
GCGGGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGCCAATATCT
+
?<@44@A2<2+CBFDFGB=E18?CF9:B;BFEFE?39?FE<FFFIEEEFI
@HWI-H232:62:C1AV0ACXX:8:1308:20073:200869 1:N:0:GCCAAT
CTCTCCGGCCTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGCCAATA
+
@@@FFFDDHHGHDICHIIIEHII:CDHGIIIIIHGGI>GDGHIECHIIIC
@HWI-H232:62:C1AV0ACXX:8:1308:20042:200910 1:N:0:GCCAAT
ACGGACTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGCCAATATCTC
+
@C@FDFFFHHGHHJIJJGIGIGIJGHIJHHHIIJJJJJJIIJJIGIJJJJ
I am asking a help for Illumina small rna sequencing data analysis. I got the small RNA sequencing data and am doing data analysis. However I have a question of small RNA adapter sequence. Here is some part of fasta file. Could you tell me which part is adapter sequence of the adapter (GCCAAT is the bar code)? I cannot find it in the website manual. Could you do me a favor? Thanks!
@HWI-H232:62:C1AV0ACXX:8:1308:20071:200816 1:N:0:GCCAAT
CCGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGCCAATATCTCGT
+
@@@FAADAFHHHHJIII;FFHHIJFGHIEGIGIGHJEIIGIIIIJGIIJH
@HWI-H232:62:C1AV0ACXX:8:1308:20244:200844 1:N:0:GCCAAT
GCGGGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGCCAATATCT
+
?<@44@A2<2+CBFDFGB=E18?CF9:B;BFEFE?39?FE<FFFIEEEFI
@HWI-H232:62:C1AV0ACXX:8:1308:20073:200869 1:N:0:GCCAAT
CTCTCCGGCCTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGCCAATA
+
@@@FFFDDHHGHDICHIIIEHII:CDHGIIIIIHGGI>GDGHIECHIIIC
@HWI-H232:62:C1AV0ACXX:8:1308:20042:200910 1:N:0:GCCAAT
ACGGACTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGCCAATATCTC
+
@C@FDFFFHHGHHJIJJGIGIGIJGHIJHHHIIJJJJJJIIJJIGIJJJJ
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