Filtering MEME

[sphil]

Hey guys,

my coworker handed me several gene names where I should identify possible TF-binding sites in the upstream region of those genes. Therefore I used MEME to discover possible motifs (i think thats one of the better tools to do it). Unfortunatelly I never really worked with motifs. Since MEME generates a couple of those i want to reduce the number of possible significant motifs. Any Idea how to cut down the data at all?

Cheers phil

thanks for your thoughts...