I want to analyse VCF files that have annotations. I used programs like VEP to annotate the file and now I want to see and manipulate these annotations that are in the file.
I'm using a Java library htsjdk but until now I didn't find any method to manipulate one column (the annotations are added in the INFO column).
Can someone help?
I'm using a Java library htsjdk but until now I didn't find any method to manipulate one column (the annotations are added in the INFO column).
Can someone help?
Comment