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11-07-2012, 08:27 PM
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Member
Location: philadelphia Join Date: Aug 2012
Posts: 13
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demultiplexing fastq data(RNA-Seq data)
Hi,
I have 3 fastq files consisting of R1, R2 read files and a separate index file. for example They are in the format below. R1: @M00132:6:000000000-A0JG4:1:1:18014:1842 1:N:0:0 Sequence data R2: @M00132:6:000000000-A0JG4:1:1:18014:1842 2:N:0:0 Sequence data Index: @M00132:6:000000000-A0JG4:1:1:18014:1842 1:N:0:0 CTCGGT + <@@DFD I want to split the R1 and R2 files based on this barcode. and create new files that contain these barcodes does any script or tool avaliable online so that i can work on it? Last edited by abh; 11-08-2012 at 11:09 AM. |
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