I think this is a relatively simple question but I haven't been able to figure out a solution yet.
Basically, I have a VCF file of variants and a GFF file of the genome with genomic features. I would like to extract the genomic features (introns, exons, etc.) of each of the variants in the VCF file.
Is there a simple way to glean this information?
Basically, I have a VCF file of variants and a GFF file of the genome with genomic features. I would like to extract the genomic features (introns, exons, etc.) of each of the variants in the VCF file.
Is there a simple way to glean this information?
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