Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • Genome Sequencing Service that provides raw, untrimmed and unassembled output data?

    Are there service providers that can just run purified, and amplified DNA through a sequencer and provide me with the output?

    The data won't need to be trimmed, or assembled. Just looking for raw, single end, short bp reads.

    Most service providers I've found seem to include assembly as a part of their service.

    Any pointers or advice to help in my hunt would be much appreciated too.

  • #2
    A minimal amount of QC needs to happen as a part of the pre-processing of sequence data (generally via vendor software). You obviously do not want to get reads that are mixed (two clusters merged/close together) etc.. But other than that most providers should give you untrimmed full length sequence data files.

    There is a list of service providers here: http://seqanswers.com/wiki/Service_Provider It does not appear to be working at the moment. Hopefully site admins will rectify that soon.

    Comment


    • #3
      Looks like the link is up!

      Thanks

      Comment

      Latest Articles

      Collapse

      • seqadmin
        Essential Discoveries and Tools in Epitranscriptomics
        by seqadmin


        The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist on Modified Bases...
        Yesterday, 07:01 AM
      • seqadmin
        Current Approaches to Protein Sequencing
        by seqadmin


        Proteins are often described as the workhorses of the cell, and identifying their sequences is key to understanding their role in biological processes and disease. Currently, the most common technique used to determine protein sequences is mass spectrometry. While still a valuable tool, mass spectrometry faces several limitations and requires a highly experienced scientist familiar with the equipment to operate it. Additionally, other proteomic methods, like affinity assays, are constrained...
        04-04-2024, 04:25 PM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by seqadmin, 04-11-2024, 12:08 PM
      0 responses
      45 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 04-10-2024, 10:19 PM
      0 responses
      46 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 04-10-2024, 09:21 AM
      0 responses
      39 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 04-04-2024, 09:00 AM
      0 responses
      55 views
      0 likes
      Last Post seqadmin  
      Working...
      X