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Old 07-05-2012, 08:18 AM   #1
Location: France

Join Date: Feb 2012
Posts: 11
Default Using Cytoscape in command lines


I would like to use Cytoscape in command lines with a simple table file. The documentation is really poor concerning the command lines, there is no example.

Does anyone ever try to use this software in command line ?

I tried this :

java -Xmx512M -jar cytoscape.jar -m table_file

i think it works because Cytoscape starts correctly but there is no network, just a blue page

Thank you

Last edited by RTK45; 07-05-2012 at 08:26 AM.
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