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Old 09-09-2010, 05:26 AM   #1
Location: shanghai, chia

Join Date: Mar 2009
Posts: 67
Default Any good idea for assembling 454 and Solexa mate-pair data

New, I am working to assemble 454 (2.9G), Solexa pair-end (insert length = 400bp, read length = 120bp) and mate-pair (insert length = 3K and 5K, read length = 36bp). I have tried many software, velvet and mira, or methods in papers, but the results were not good. Is there any good method to assemble them.
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