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has anybody done de novo transcriptome assembly? are there any tools to do this? which one is better?
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on top of my head, you can use trans-abyss. -
thanks.
i have many RNA-seq data, and the reference is not very good, so i want to generate a new transcriptome assembly. can trans-abyss do this?Comment
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yes they can, but i never use them though so i dont know about the quality. Read about it on their paper "De novo assembly and analysis of RNA-seq data".Comment
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you are so kind, thanks again.Comment
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