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Old 04-14-2016, 06:10 AM   #1
wingtec
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Default use of BaseSpace app for outside data

Hi All,

Has anyone tried to import outside work into a project in BaseSpace and then use the Apps in BaseSpace to process the data, such as tophat?

Thanks

Wing
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Old 04-14-2016, 07:42 AM   #2
westerman
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Yes, I have tried. Did not work as of about 6 months ago.
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Old 04-14-2016, 03:22 PM   #3
ScottC
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Yes. What in particular did you want to know?
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Old 04-19-2016, 10:23 AM   #4
wingtec
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I am just wondering if I can take a piggy-back of the APPs in BaseSpace for analysis of, say, RNA-Seq data, which were generated outside of BaseSpace.

Thanks

W
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Old 04-22-2016, 07:43 AM   #5
bbm
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Quote:
Originally Posted by wingtec View Post
I am just wondering if I can take a piggy-back of the APPs in BaseSpace for analysis of, say, RNA-Seq data, which were generated outside of BaseSpace.

Thanks

W
I have the same question....any answers?
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Old 04-22-2016, 09:31 AM   #6
fanli
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Seems like more work than it's worth IMO. Why not use Galaxy if that's what you're looking for?
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