When I run bedtools 2.25.0 covereBed, the command below does run.
There are 11.5 millino bases in each file and when I am running bedTools any other process is very slow.
I am using ubuntu 14.04, 64 bit witn 64GB, Xeon processor with 8 cores and 20MB cache.
Is this normal? Thanks.
Code:
coverageBed -d -g custom.genome.txt -a targets.bed -b file.txt > base_counts.txt
There are 11.5 millino bases in each file and when I am running bedTools any other process is very slow.
I am using ubuntu 14.04, 64 bit witn 64GB, Xeon processor with 8 cores and 20MB cache.
Is this normal? Thanks.
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