for example,
7 151843760 T 33 .$,$,....,.,......,.,..,..,,..,,,.^g, >@FDCDDJEIDDEIHGJAJJIEJJFEIHDDDCC
I know the col1=chromosome, col2=base position col3=reference seq col4=depth
but what's the meaning of col5 and col6?
i thought that col4=match result of each read compared with reference and col5=quality score of each base.
then what's the meanig of each characters of col5 - .,$^g ...etc
somebody please tell me the meaning or give me link about the meaning!
thank you
7 151843760 T 33 .$,$,....,.,......,.,..,..,,..,,,.^g, >@FDCDDJEIDDEIHGJAJJIEJJFEIHDDDCC
I know the col1=chromosome, col2=base position col3=reference seq col4=depth
but what's the meaning of col5 and col6?
i thought that col4=match result of each read compared with reference and col5=quality score of each base.
then what's the meanig of each characters of col5 - .,$^g ...etc
somebody please tell me the meaning or give me link about the meaning!
thank you
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