Hi everyone,
Illumina will release secondary analysis tools using either the GPLv3 or BSD 2-Clause license. The tools can be found at https://github.com/illumina. We have started with the Isaac2 aligner (an improvement on the previously published version) and the Manta structural variant caller (manuscript submitted). In the coming weeks, we will add the Strelka somatic variant caller, the Canvas copy number caller (manuscript in preparation), and various other tools.
I will be happy to answer any questions that you may have.
Thank you,
Semyon
(member of the Bioinfo group at Illumina)
Illumina will release secondary analysis tools using either the GPLv3 or BSD 2-Clause license. The tools can be found at https://github.com/illumina. We have started with the Isaac2 aligner (an improvement on the previously published version) and the Manta structural variant caller (manuscript submitted). In the coming weeks, we will add the Strelka somatic variant caller, the Canvas copy number caller (manuscript in preparation), and various other tools.
I will be happy to answer any questions that you may have.
Thank you,
Semyon
(member of the Bioinfo group at Illumina)
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