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  • measuring mutation rates from NGS data

    Dear all,

    Do you know of any list of software that can calculate population mutation rates from NGS data.

    Thanks a lot.

  • #2
    You can estimate the heterozygousity rate in an individual of a diploid species with kmer-frequency graphs from whole-genome NGS data. But as far as populations go - well, it really depends on what kind of data you have at your disposal. Can you be more specific?

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