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Old 05-11-2015, 08:54 PM   #1
nbahlis
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Default DESeq2 and genomic ranges

Is it possible to create a bed file or extract the genomic coordinates (start, end and strand) from the list of DE genes generated by DESeq2?
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Old 05-11-2015, 11:57 PM   #2
shunyip
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You can first download a BED file from https://genome.ucsc.edu/cgi-bin/hgTables?org=human

and then write a script to extract the genes that you are looking at.
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