maq map aln.map ref.bfa reads.bfq
maq mapview aln.map > aln.out
The aln.out is text file and aln.map is binary file.
I filter some reads in aln.out and want to convert the new aln.out to .map file.
Because pileup command need .map file.
How can I convert .out to .map ?
maq mapview aln.map > aln.out
The aln.out is text file and aln.map is binary file.
I filter some reads in aln.out and want to convert the new aln.out to .map file.
Because pileup command need .map file.
How can I convert .out to .map ?
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